---
title: "Reproducible Reseach with Quarto"
subtitle: "Demo for BDSI Workshop"
author:  
  - name: Emi Tanaka
    orcid: 0000-0002-1455-259X
    email: workshop.bdsi@anu.edu.au
    affiliation: "Australian National University"
    department: "Biological Data Science Institute"
  - "Chat GPT"
  # for other author formats, see https://quarto.org/docs/journals/authors.html
keywords: 
  - reproducible research
  - quarto 
  - markdown
abstract: | 
  Reproducible research is indispensable for ensuring the trustworthiness of scientific findings. This abstract explores its significance, emphasizing open access to data, code, and documentation. Key practices such as version control and reproducible environments are highlighted for their role in enhancing verifiability. Additionally, the integration of reproducibility criteria in peer review is discussed. Overall, reproducible research serves as a vital framework for advancing scientific knowledge with transparency and integrity.
date: "2024-04-12"
date-format: "Do MMMM YYYY" # see https://quarto.org/docs/reference/dates.html
date-modified: today
format: 
  html:
    # for other options, see https://quarto.org/docs/reference/formats/html.html
    toc: true
    number-sections: true
    theme: superhero # for other themes see https://quarto.org/docs/output-formats/html-themes.html
---

## Introduction 

Reproducible research refers to the practice of making research methods, data, and results transparent and accessible so that others can verify and replicate the findings. The goal of reproducibility is to ensure that scientific findings are trustworthy and can be independently validated.


## Tasks

::: callout-important

Try modifying the **YAML** of this file so that the values are reflective of your own research or interests. You can change the title, author information, abstract, and content to align with your topic of choice.

:::


## Conclusion 

Reproducible research not only fosters trust in scientific findings but also promotes collaboration and innovation by allowing others to build upon existing research. Many journals and funding agencies now require or encourage researchers to adopt reproducible practices to improve the reliability and credibility of scientific research.